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PSME_00011245-RA


Description : (at3g52950 : 567.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1). & (reliability: 1134.0) & (original description: no original description)


Gene families : OG_42_0000930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011245-RA
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Bradi4g41527 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.03 Orthogroups_2024-Update
Pp1s11_325V6 No alias cbs domain containing protein 0.05 Orthogroups_2024-Update
Seita.7G286500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g019680 No alias CBS domain-containing protein (AHRD V3.3 *** W9QLL8_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 424 504
IPR000644 CBS_dom 301 343
IPR000644 CBS_dom 133 178
IPR000644 CBS_dom 73 119
IPR000644 CBS_dom 242 288
No external refs found!