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  5. PSME_00011861-RA

PSME_00011861-RA


Description : (at1g76590 : 176.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G21000.1); Has 404 Blast hits to 404 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 402; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00011861-RA
Cluster HCCA clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
A4A49_35279 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_35786 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g43000 No alias PLATZ transcription factor family protein... 0.02 Orthogroups_2024-Update
At1g76590 No alias At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3] 0.03 Orthogroups_2024-Update
Brara.B02918.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G03455.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.11G030900 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.11G169264 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.15G200100 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.19G188200 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
Kfl00005_0330 kfl00005_0330_v1.1 (at2g12646 : 175.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
LOC_Os02g10000 No alias zinc-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g46610 No alias zinc-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50120 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g45540 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429334g0010 No alias (at2g12646 : 189.0) PLATZ transcription factor family... 0.04 Orthogroups_2024-Update
MA_18612g0010 No alias (at2g12646 : 253.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
Potri.006G119400 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
Pp1s133_60V6 No alias F6N18.8; zinc-binding family protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.1G279800.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g091000 No alias PLATZ transcription factor family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc08g076860 No alias PLATZ transcription factor family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen08g025390 No alias PLATZ transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 75 146
No external refs found!