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- Pseudotsuga menziesii
- Sequence
- PSME_00012013-RA
PSME_00012013-RA
Description : (p30298|sus1_orysa : 230.0) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose synthase 2) (Sucrose-UDP glucosyltransferase 1) - Oryza sativa (Rice) & (at5g49190 : 229.0) Encodes a sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). However, analyses of an sus2 mutant revealed a deficiency in sucrose synthase activity 12 and 15 days after flowering. There are some reports that SUS2 transcript levels are increased in leaves specifically by O(2) deficiency whereas other reports indicate that SUS2 is expressed only in seeds. Immulocalization shows that SUS2 is present in the cytosol of developing seeds, but, it also associated with plastids, though not located within them.; sucrose synthase 2 (SUS2); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, seed maturation, response to hypoxia, sucrose metabolic process, starch metabolic process; LOCATED IN: cytosol, plastid, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 3 (TAIR:AT4G02280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00012013-RA | |
| Cluster | HCCA clusters: Cluster_137 | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| BP | GO:0005975 | carbohydrate metabolic process | None | Extended |
| BP | GO:0005984 | disaccharide metabolic process | None | Extended |
| BP | GO:0005985 | sucrose metabolic process | IEA | InterProScan predictions |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0008194 | UDP-glycosyltransferase activity | None | Extended |
| BP | GO:0009311 | oligosaccharide metabolic process | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| MF | GO:0016157 | sucrose synthase activity | IEA | InterProScan predictions |
| MF | GO:0016740 | transferase activity | None | Extended |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | None | Extended |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | None | Extended |
| MF | GO:0035251 | UDP-glucosyltransferase activity | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044262 | cellular carbohydrate metabolic process | None | Extended |
| MF | GO:0046527 | glucosyltransferase activity | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004126 | cytidine deaminase activity | IEP | Predicted GO |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0006216 | cytidine catabolic process | IEP | Predicted GO |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Predicted GO |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Predicted GO |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| BP | GO:0009164 | nucleoside catabolic process | IEP | Predicted GO |
| BP | GO:0009972 | cytidine deamination | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
| BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
| CC | GO:0031390 | Ctf18 RFC-like complex | IEP | Predicted GO |
| BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Predicted GO |
| BP | GO:0042454 | ribonucleoside catabolic process | IEP | Predicted GO |
| BP | GO:0046087 | cytidine metabolic process | IEP | Predicted GO |
| BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Predicted GO |
| BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | Predicted GO |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR000368 | Sucrose_synth | 2 | 102 |
