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  5. PSME_00012314-RA

PSME_00012314-RA


Description : (at1g69550 : 176.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012314-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.05 Orthogroups_2024-Update
MA_10435970g0030 No alias (at1g69550 : 82.8) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10436182g0010 No alias (at1g69550 : 237.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_131467g0010 No alias (at1g69550 : 225.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_6154g0010 No alias (at1g69550 : 104.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_9403319g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00001435-RA No alias (at1g69550 : 295.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00003863-RA No alias (at2g14080 : 112.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00009641-RA No alias (at1g69550 : 179.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00016259-RA No alias (at1g69550 : 370.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00017633-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00019336-RA No alias (at1g69550 : 183.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00022892-RA No alias (at1g69550 : 93.6) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00025149-RA No alias (at1g69550 : 231.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00025240-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00028282-RA No alias (at1g69550 : 219.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00029570-RA No alias (at1g69550 : 193.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00034830-RA No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035584-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00038511-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00038789-RA No alias (at1g69550 : 138.0) disease resistance protein... 0.08 Orthogroups_2024-Update
PSME_00039413-RA No alias (at1g69550 : 213.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00044350-RA No alias (at1g69550 : 194.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00053001-RA No alias (at1g69550 : 147.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00055013-RA No alias (at1g69550 : 137.0) disease resistance protein... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!