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  5. PSME_00012405-RA

PSME_00012405-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0006660 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012405-RA
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
MA_103565g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10437100g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_167628g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001727 Gdt1 87 132
No external refs found!