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  5. PSME_00012458-RA

PSME_00012458-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012458-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Kfl00012_0330 kfl00012_0330_v1.1 (at2g24260 : 109.0) Encodes a basic helix-loop-helix... 0.02 Orthogroups_2024-Update
LOC_Os02g55250 No alias BHLH transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00015862-RA No alias (at5g58010 : 119.0) Encodes a basic helix-loop-helix... 0.05 Orthogroups_2024-Update
Potri.006G135600 No alias LJRHL1-like 3 0.02 Orthogroups_2024-Update
Potri.013G041000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 48 72
No external refs found!