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  5. PSME_00012658-RA

PSME_00012658-RA


Description : (q9lef0|gpx4_mescr : 172.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Mesembryanthemum crystallinum (Common ice plant) & (at4g11600 : 159.0) Encodes glutathione peroxidase.; glutathione peroxidase 6 (GPX6); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, response to metal ion; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7601 Blast hits to 7600 proteins in 1766 species: Archae - 2; Bacteria - 3728; Metazoa - 790; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2480 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)


Gene families : OG_42_0000578 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012658-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
MA_900268g0010 No alias (o23814|gpx4_spiol : 254.0) Probable phospholipid... 0.05 Orthogroups_2024-Update
PSME_00005641-RA No alias (o23814|gpx4_spiol : 288.0) Probable phospholipid... 0.04 Orthogroups_2024-Update
PSME_00015381-RA No alias (o23814|gpx4_spiol : 274.0) Probable phospholipid... 0.04 Orthogroups_2024-Update
Sobic.006G173900.1 No alias glutathione peroxidase & EC_1.11 oxidoreductase acting... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEA InterProScan predictions
BP GO:0006979 response to oxidative stress IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000889 Glutathione_peroxidase 65 107
No external refs found!