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  5. PSME_00012731-RA

PSME_00012731-RA


Description : (at2g28120 : 191.0) Major facilitator superfamily protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G39210.1); Has 3034 Blast hits to 2940 proteins in 680 species: Archae - 38; Bacteria - 1235; Metazoa - 42; Fungi - 225; Plants - 608; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). & (gnl|cdd|38754 : 95.9) no description available & (reliability: 382.0) & (original description: no original description)


Gene families : OG_42_0000246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00012731-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
At1g78210 No alias Alpha/beta-Hydrolases superfamily protein... 0.03 Orthogroups_2024-Update
HORVU0Hr1G009100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G029840.8 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10431368g0010 No alias (at5g09430 : 212.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
MA_119803g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_12747g0010 No alias (at5g21950 : 187.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
MA_20351g0010 No alias (at5g09430 : 179.0) alpha/beta-Hydrolases superfamily... 0.06 Orthogroups_2024-Update
MA_65563g0010 No alias (at5g09430 : 325.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
PSME_00017557-RA No alias (at4g36610 : 197.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
PSME_00019546-RA No alias (at5g09430 : 320.0) alpha/beta-Hydrolases superfamily... 0.05 Orthogroups_2024-Update
PSME_00051493-RA No alias (at5g09430 : 156.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
Potri.001G313100 No alias alpha/beta-Hydrolases superfamily protein 0.05 Orthogroups_2024-Update
Potri.017G053300 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Pp1s275_10V6 No alias F4I10.110; hydrolase, alpha/beta fold family protein... 0.02 Orthogroups_2024-Update
Seita.9G380000.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G053400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G266700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g061240 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 1581 1778
No external refs found!