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  5. PSME_00013124-RA

PSME_00013124-RA


Description : (p93665|dcs1_goshi : 234.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at2g24210 : 230.0) terpene synthase 10 (TPS10); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1742 Blast hits to 1707 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1738; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013124-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
407280 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 Orthogroups_2024-Update
412139 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
A4A49_07214 No alias (-)-alpha-terpineol synthase 0.04 Orthogroups_2024-Update
GRMZM2G108609 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G102000 No alias terpene synthase-like sequence-1,8-cineole 0.02 Orthogroups_2024-Update
Glyma.13G304700 No alias terpene synthase 02 0.03 Orthogroups_2024-Update
HORVU7Hr1G111960.3 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
MA_10196363g0010 No alias (p59287|cass_ricco : 245.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
MA_10434542g0010 No alias (p93665|dcs1_goshi : 258.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
MA_10435955g0010 No alias (o04408|ksa_pea : 162.0) Ent-kaurene synthase A,... 0.03 Orthogroups_2024-Update
MA_1830g0010 No alias (p59287|cass_ricco : 269.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
MA_328490g0010 No alias (p93665|dcs1_goshi : 244.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
MA_343069g0010 No alias (o04408|ksa_pea : 131.0) Ent-kaurene synthase A,... 0.05 Orthogroups_2024-Update
MA_8002141g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_9461183g0010 No alias (at4g16740 : 171.0) Encodes an (E,E)-alpha-farnesene... 0.06 Orthogroups_2024-Update
PSME_00007190-RA No alias (at3g25810 : 158.0) Terpenoid cyclases/Protein... 0.04 Orthogroups_2024-Update
PSME_00007330-RA No alias (at4g16740 : 150.0) Encodes an (E,E)-alpha-farnesene... 0.04 Orthogroups_2024-Update
PSME_00008408-RA No alias (at4g02780 : 401.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
PSME_00011600-RA No alias (p59287|cass_ricco : 229.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
PSME_00012241-RA No alias (p93665|dcs1_goshi : 211.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
PSME_00017294-RA No alias (at4g02780 : 138.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
PSME_00029104-RA No alias (p59287|cass_ricco : 216.0) Casbene synthase,... 0.05 Orthogroups_2024-Update
PSME_00033301-RA No alias (p59287|cass_ricco : 246.0) Casbene synthase,... 0.05 Orthogroups_2024-Update
PSME_00034521-RA No alias (p93665|dcs1_goshi : 185.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
Potri.011G031800 No alias terpene synthase-like sequence-1,8-cineole 0.03 Orthogroups_2024-Update
Potri.T072900 No alias terpene synthase-like sequence-1,8-cineole 0.04 Orthogroups_2024-Update
Sobic.002G002300.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.006G027500.2 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Solyc01g105850 No alias (E)-beta-ocimene synthase (AHRD V1 **** Q5CD81_CITUN)%3B... 0.03 Orthogroups_2024-Update
Solyc01g105860 No alias (R)-limonene synthase (AHRD V1 ***- B9T537_RICCO)%3B... 0.04 Orthogroups_2024-Update
Solyc02g079910 No alias Terpene synthase (AHRD V3.3 *-* G5CV48_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 79 272
IPR005630 Terpene_synthase_metal-bd 310 574
No external refs found!