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  5. PSME_00013682-RA

PSME_00013682-RA


Description : (at5g52450 : 512.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1024.0) & (original description: no original description)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00013682-RA
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
At1g15150 No alias Protein DETOXIFICATION 10... 0.04 Orthogroups_2024-Update
At2g04050 No alias Protein DETOXIFICATION 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIA4] 0.03 Orthogroups_2024-Update
At2g04070 No alias Protein DETOXIFICATION 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIA3] 0.05 Orthogroups_2024-Update
Bradi1g66270 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi2g16887 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi4g39390 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.F01030.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.K00358.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
GRMZM2G075828 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
GRMZM2G133006 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.10G267300 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
MA_14711g0010 No alias (at5g52450 : 528.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
Seita.1G131200.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Seita.2G324100.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Seita.7G064100.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Seita.9G071700.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sobic.002G311200.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Sopen02g014340 No alias MatE 0.03 Orthogroups_2024-Update
Sopen03g037890 No alias MatE 0.03 Orthogroups_2024-Update
Sopen03g037900 No alias MatE 0.03 Orthogroups_2024-Update
Sopen10g002980 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 73 233
IPR002528 MATE_fam 294 456
No external refs found!