PSME_00013829-RA

Description : (at1g56140 : 516.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 186029 Blast hits to 134018 proteins in 4752 species: Archae - 143; Bacteria - 15786; Metazoa - 51681; Fungi - 11229; Plants - 84240; Viruses - 441; Other Eukaryotes - 22509 (source: NCBI BLink). & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1032.0) & (original description: no original description)

Gene families : OG_42_0000463 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00013829-RA
Cluster	HCCA clusters: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
438852	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
At1g56120	No alias	Leucine-rich repeat transmembrane protein kinase...	0.04	Orthogroups_2024-Update
Bradi5g21857	No alias	Leucine-rich repeat transmembrane protein kinase	0.04	Orthogroups_2024-Update
Brara.B02450.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.G00478.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Glyma.08G235900	No alias	Leucine-rich repeat transmembrane protein kinase	0.04	Orthogroups_2024-Update
HORVU3Hr1G093550.9	No alias	LRR-VIII-2 protein kinase & EC_2.7 transferase...	0.06	Orthogroups_2024-Update
LOC_Os04g52614	No alias	SHR5-receptor-like kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g07130	No alias	SHR5-receptor-like kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g10290	No alias	SHR5-receptor-like kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g10310	No alias	SHR5-receptor-like kinase, putative, expressed	0.02	Orthogroups_2024-Update
MA_18275g0010	No alias	(at1g56145 : 212.0) Leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
PSME_00003486-RA	No alias	(at1g56120 : 424.0) Leucine-rich repeat transmembrane...	0.04	Orthogroups_2024-Update
PSME_00007110-RA	No alias	(at1g56145 : 228.0) Leucine-rich repeat transmembrane...	0.04	Orthogroups_2024-Update
PSME_00020426-RA	No alias	(at1g56120 : 122.0) Leucine-rich repeat transmembrane...	0.05	Orthogroups_2024-Update
PSME_00025431-RA	No alias	(at1g56140 : 539.0) Leucine-rich repeat transmembrane...	0.04	Orthogroups_2024-Update
PSME_00036494-RA	No alias	(at1g56140 : 523.0) Leucine-rich repeat transmembrane...	0.06	Orthogroups_2024-Update
Potri.001G082900	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
Potri.T008400	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	281	543
IPR021720	Malectin_dom	4	195

External Links

No external refs found!

PSME_00013829-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation