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  5. PSME_00014724-RA

PSME_00014724-RA


Description : (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (at1g15520 : 1807.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 3614.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014724-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
173584 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
235359 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
412710 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.04 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.08 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
99541 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_09054 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_10347 No alias pleiotropic drug resistance protein 1 0.04 Orthogroups_2024-Update
A4A49_13046 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_23886 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_31699 No alias pleiotropic drug resistance protein 2 0.03 Orthogroups_2024-Update
At1g15520 No alias ABC transporter G family member 40... 0.06 Orthogroups_2024-Update
At2g36380 No alias ABC transporter G family member 34... 0.02 Orthogroups_2024-Update
At3g53480 No alias ABC transporter G family member 37... 0.03 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Bradi3g34890 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Brara.C01827.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.D02216.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Brara.F01068.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.G01592.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Cre11.g467597 No alias pleiotropic drug resistance 10 0.01 Orthogroups_2024-Update
GRMZM2G118243 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
GRMZM5G874955 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.06 Orthogroups_2024-Update
Glyma.04G069800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.07G015800 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.07G033500 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Glyma.10G203000 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.13G361900 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
Glyma.15G011900 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
HORVU3Hr1G053350.8 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
HORVU5Hr1G124650.12 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
HORVU7Hr1G092510.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Kfl00010_0550 kfl00010_0550_v1.1 (q76cu2|pdr1_tobac : 717.0) Pleiotropic drug resistance... 0.01 Orthogroups_2024-Update
Kfl00361_0030 kfl00361_0030_v1.1 (q5z9s8|pdr12_orysa : 1282.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g42380 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g21340 No alias ABC-2 type transporter family protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g32690 No alias pleiotropic drug resistance protein 15, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g36090 No alias ABC-2 type transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g29570 No alias pleiotropic drug resistance protein 3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.03 Orthogroups_2024-Update
LOC_Os09g16380 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g13830 No alias pleiotropic drug resistance protein 13, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.03 Orthogroups_2024-Update
MA_10425791g0020 No alias (q8gu88|pdr7_orysa : 1086.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.04 Orthogroups_2024-Update
MA_10430834g0020 No alias (q7fmw4|pdr15_orysa : 384.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_135152g0010 No alias (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... 0.06 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_598099g0010 No alias (q5z9s8|pdr12_orysa : 976.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_949447g0010 No alias (q8gu92|pdr2_orysa : 473.0) Probable pleiotropic drug... 0.03 Orthogroups_2024-Update
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Mp8g09300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Mp8g13070.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.05 Orthogroups_2024-Update
PSME_00001762-RA No alias (q5z9s8|pdr12_orysa : 1873.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00002220-RA No alias (q5z9s8|pdr12_orysa : 1203.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00007073-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00008988-RA No alias (q5z9s8|pdr12_orysa : 1221.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.06 Orthogroups_2024-Update
PSME_00011269-RA No alias (q7fmw4|pdr15_orysa : 576.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00012292-RA No alias (at2g29940 : 1536.0) pleiotropic drug resistance 3... 0.04 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00037776-RA No alias (at1g59870 : 665.0) ATP binding cassette transporter.... 0.01 Orthogroups_2024-Update
Potri.001G049000 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Potri.001G175700 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.003G179000 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Potri.006G248500 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.010G235800 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
Pp1s12_29V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Pp1s160_34V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s36_257V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.5G221600.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.9G304200.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Sobic.004G087700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc05g053590 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc05g055330 No alias Drug resistance transporter-like ABC domain protein... 0.02 Orthogroups_2024-Update
Solyc09g091670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g007280 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g100190 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen03g039810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen05g032120 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen09g034570 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update
Sopen11g003180 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen12g034820 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
evm.model.contig_440.1 No alias (at2g29940 : 522.0) pleiotropic drug resistance 3... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1192 1405
IPR013525 ABC_2_trans 516 728
IPR003439 ABC_transporter-like 894 1046
IPR013581 PDR_assoc 736 792
IPR029481 ABC_trans_N 91 154
IPR003439 ABC_transporter-like 180 362
No external refs found!