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  5. PSME_00015260-RA

PSME_00015260-RA


Description : (at1g22640 : 149.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p20026|myb1_horvu : 140.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 270.0) & (original description: no original description)


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00015260-RA
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
A4A49_23394 No alias transcription factor myb44 0.02 Orthogroups_2024-Update
At1g26780 No alias MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3] 0.02 Orthogroups_2024-Update
At4g18770 No alias Transcription factor MYB98... 0.03 Orthogroups_2024-Update
Bradi1g30252 No alias myb domain protein r1 0.02 Orthogroups_2024-Update
Bradi2g28910 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Bradi2g55303 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Brara.G02889.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01778.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Glyma.04G184200 No alias myb domain protein 98 0.04 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.16G072700 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Glyma.17G245200 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Kfl00085_0320 kfl00085_0320_v1.1 (at3g55730 : 152.0) putative transcription factor MYB109... 0.02 Orthogroups_2024-Update
LOC_Os06g43090 No alias MYB transcription factor TaMYB1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G128900 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Potri.003G123800 No alias Homeodomain-like protein 0.02 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.03 Orthogroups_2024-Update
Pp1s10_267V6 No alias r2r3-myb transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 66 110
IPR001005 SANT/Myb 14 60
No external refs found!