PSME_00015316-RA

Description : (q2pcf1|pdr2_nicpl : 1867.0) Pleiotropic drug resistance protein 2 (NpPDR2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g66950 : 1823.0) pleiotropic drug resistance 11 (PDR11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 6 (TAIR:AT2G36380.1); Has 357151 Blast hits to 273757 proteins in 3981 species: Archae - 7090; Bacteria - 287486; Metazoa - 9208; Fungi - 6204; Plants - 5777; Viruses - 4; Other Eukaryotes - 41382 (source: NCBI BLink). & (reliability: 3646.0) & (original description: no original description)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00015316-RA
Cluster	HCCA clusters: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
118688	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
267739	No alias	pleiotropic drug resistance 6	0.02	Orthogroups_2024-Update
Bradi1g78752	No alias	pleiotropic drug resistance 5	0.02	Orthogroups_2024-Update
Brara.F01033.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Brara.F01034.1	No alias	subfamily ABCG transporter	0.05	Orthogroups_2024-Update
Cre16.g655450	No alias	pleiotropic drug resistance 3	0.02	Orthogroups_2024-Update
Glyma.03G168000	No alias	pleiotropic drug resistance 12	0.05	Orthogroups_2024-Update
Glyma.04G069800	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Kfl00018_0500	kfl00018_0500_v1.1	(q8gu90\|pdr3_orysa : 1455.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
LOC_Os01g42380	No alias	pleiotropic drug resistance protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g43120	No alias	Plant PDR ABC transporter associated domain containing...	0.02	Orthogroups_2024-Update
PSME_00009192-RA	No alias	(q8gu88\|pdr7_orysa : 1875.0) Putative pleiotropic drug...	0.04	Orthogroups_2024-Update
Potri.001G048700	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Potri.008G098850	No alias	pleiotropic drug resistance 7	0.03	Orthogroups_2024-Update
Seita.2G179600.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.4G181500.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.5G221700.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.9G187800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.003G215800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.003G216166.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sopen05g032110	No alias	ABC-2 type transporter	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0008150	biological_process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008378	galactosyltransferase activity	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	526	738
IPR013525	ABC_2_trans	1251	1463
IPR029481	ABC_trans_N	102	165
IPR003439	ABC_transporter-like	190	372
IPR013581	PDR_assoc	743	809
IPR003439	ABC_transporter-like	922	1074

External Links

No external refs found!

PSME_00015316-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation