PSME_00015828-RA

Description : (at2g44740 : 200.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description)

Gene families : OG_42_0000447 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00015828-RA
Cluster	HCCA clusters: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
At3g21870	No alias	Cyclin-U1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJ45]	0.03	Orthogroups_2024-Update
At3g63120	No alias	Cyclin-U3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB60]	0.02	Orthogroups_2024-Update
GRMZM2G148621	No alias	cyclin p2;1	0.03	Orthogroups_2024-Update
Kfl00152_0030	kfl00152_0030_v1.1	(at2g44740 : 171.0) cyclin p4;1 (CYCP4;1); CONTAINS...	0.01	Orthogroups_2024-Update
LOC_Os04g53680	No alias	cyclin, putative, expressed	0.03	Orthogroups_2024-Update
MA_80306g0010	No alias	(at2g44740 : 154.0) cyclin p4;1 (CYCP4;1); CONTAINS...	0.04	Orthogroups_2024-Update
Mp3g25260.1	No alias	cyclin (CYCP)	0.02	Orthogroups_2024-Update
Potri.013G023000	No alias	Cyclin family protein	0.02	Orthogroups_2024-Update
Seita.1G255400.1	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.03	Orthogroups_2024-Update
Seita.3G251400.1	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.03	Orthogroups_2024-Update
Sobic.004G298500.2	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.02	Orthogroups_2024-Update
Sobic.006G225200.2	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.02	Orthogroups_2024-Update
Sobic.009G129500.1	No alias	regulatory protein *(CYCP(CYCU) of cell cycle	0.03	Orthogroups_2024-Update
evm.model.contig_554.8	No alias	(at2g44740 : 128.0) cyclin p4;1 (CYCP4;1); CONTAINS...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	InterProScan predictions
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	InterProScan predictions
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004417	hydroxyethylthiazole kinase activity	IEP	Predicted GO
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006772	thiamine metabolic process	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009228	thiamine biosynthetic process	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0016559	peroxisome fission	IEP	Predicted GO
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Predicted GO
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predicted GO
CC	GO:0031301	integral component of organelle membrane	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
BP	GO:0048285	organelle fission	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	75	189

External Links

No external refs found!

PSME_00015828-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation