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  5. PSME_00016740-RA

PSME_00016740-RA


Description : (at4g20140 : 524.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 414.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1048.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016740-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
101476 No alias Leucine-rich repeat family protein 0.03 Orthogroups_2024-Update
120629 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
405170 No alias ERECTA-like 1 0.03 Orthogroups_2024-Update
A4A49_18087 No alias putative lrr receptor-like serinethreonine-protein kinase 0.02 Orthogroups_2024-Update
Bradi1g47107 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi1g47130 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi1g47990 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g10998 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g11740 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g12990 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi5g03977 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Brara.C03935.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02261.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Brara.J01572.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
GRMZM2G012685 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
GRMZM2G389948 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Glyma.07G155800 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.08G128900 No alias EF-TU receptor 0.03 Orthogroups_2024-Update
HORVU2Hr1G127100.9 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
LOC_Os11g07250 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g07260 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_10350490g0010 No alias (at3g47570 : 249.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_10435743g0020 No alias (at1g35710 : 155.0) Protein kinase family protein with... 0.06 Orthogroups_2024-Update
MA_10436851g0010 No alias (at5g46330 : 411.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
MA_153816g0010 No alias (at3g47110 : 363.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_173608g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_189242g0010 No alias (at1g25320 : 81.6) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_514155g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_805205g0020 No alias (at2g24130 : 159.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_8334663g0010 No alias (at5g20480 : 141.0) Encodes a predicted leucine-rich... 0.05 Orthogroups_2024-Update
MA_85663g0010 No alias (at5g46330 : 340.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
Mp3g14080.1 No alias Probable leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
PSME_00002258-RA No alias (at3g47570 : 249.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00011167-RA No alias (at4g08850 : 300.0) Leucine-rich repeat receptor-like... 0.05 Orthogroups_2024-Update
PSME_00014185-RA No alias (at3g24240 : 256.0) Leucine-rich repeat receptor-like... 0.03 Orthogroups_2024-Update
PSME_00021673-RA No alias (at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00024176-RA No alias (at4g20140 : 447.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00025380-RA No alias (at3g24240 : 244.0) Leucine-rich repeat receptor-like... 0.04 Orthogroups_2024-Update
PSME_00027031-RA No alias (at3g47570 : 470.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00031091-RA No alias (at5g46330 : 205.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00031300-RA No alias (at3g47110 : 131.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00032810-RA No alias (at5g46330 : 206.0) Encodes a leucine-rich repeat... 0.08 Orthogroups_2024-Update
PSME_00035635-RA No alias (at3g47110 : 648.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00036348-RA No alias (at2g24130 : 481.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00038472-RA No alias (at5g46330 : 359.0) Encodes a leucine-rich repeat... 0.06 Orthogroups_2024-Update
PSME_00039997-RA No alias (at2g24130 : 449.0) Leucine-rich receptor-like protein... 0.06 Orthogroups_2024-Update
PSME_00040101-RA No alias (at2g24130 : 273.0) Leucine-rich receptor-like protein... 0.06 Orthogroups_2024-Update
PSME_00040826-RA No alias (at5g63930 : 192.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00041027-RA No alias (at3g24240 : 280.0) Leucine-rich repeat receptor-like... 0.04 Orthogroups_2024-Update
PSME_00042187-RA No alias (at2g24130 : 489.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00043488-RA No alias (at2g24130 : 332.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00044449-RA No alias (at5g20480 : 591.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
PSME_00044948-RA No alias (at3g47110 : 644.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00050999-RA No alias (at5g46330 : 144.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00051160-RA No alias (at5g20480 : 127.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00051245-RA No alias (at1g35710 : 388.0) Protein kinase family protein with... 0.04 Orthogroups_2024-Update
PSME_00053316-RA No alias (at2g24130 : 617.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00054181-RA No alias (at2g24130 : 94.4) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00055531-RA No alias (at5g46330 : 107.0) Encodes a leucine-rich repeat... 0.06 Orthogroups_2024-Update
PSME_00056030-RA No alias (at2g26330 : 241.0) Homologous to receptor protein... 0.04 Orthogroups_2024-Update
PSME_00056074-RA No alias (at5g07280 : 194.0) Encodes EMS1 (EXCESS... 0.04 Orthogroups_2024-Update
Potri.008G033900 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Potri.010G228301 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.015G037400 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Potri.016G029900 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.017G115900 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.1G185000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Seita.4G231800.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.5G105200.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.5G105900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.05 Orthogroups_2024-Update
Seita.J030600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.003G069700.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.004G217500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Sobic.005G205300.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.008G065200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.010G067400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sopen02g021350 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen06g002010 No alias Protein kinase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 481 503
IPR001611 Leu-rich_rpt 602 661
IPR001611 Leu-rich_rpt 409 468
IPR001611 Leu-rich_rpt 756 811
IPR000719 Prot_kinase_dom 957 1129
IPR000719 Prot_kinase_dom 1247 1450
IPR013210 LRR_N_plant-typ 52 89
No external refs found!