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  5. PSME_00017375-RA

PSME_00017375-RA


Description : (p23546|e13e_tobac : 273.0) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLA) - Nicotiana tabacum (Common tobacco) & (at2g01630 : 271.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 542.0) & (original description: no original description)


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017375-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_01055 No alias glucan endo-1,3-beta-glucosidase, acidic isoform gi9 0.02 Orthogroups_2024-Update
A4A49_28305 No alias glucan endo-1,3-beta-glucosidase, basic vacuolar isoform ggib50 0.03 Orthogroups_2024-Update
At3g57240 No alias Probable glucan endo-1,3-beta-glucosidase BG3... 0.03 Orthogroups_2024-Update
At3g57260 No alias Beta-1,3-glucanase 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMG6] 0.05 Orthogroups_2024-Update
At3g57270 No alias Probable glucan endo-1,3-beta-glucosidase BG1... 0.02 Orthogroups_2024-Update
At5g20340 No alias Probable glucan endo-1,3-beta-glucosidase BG5... 0.02 Orthogroups_2024-Update
Bradi2g27140 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g43056 No alias beta-1,3-glucanase 1 0.07 Orthogroups_2024-Update
Bradi2g60441 No alias beta-1,3-glucanase 2 0.03 Orthogroups_2024-Update
Bradi2g60490 No alias Glycosyl hydrolase superfamily protein 0.08 Orthogroups_2024-Update
Brara.B00880.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.D00297.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.D00302.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G123107 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Glyma.11G095100 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G113200 No alias Glycosyl hydrolase superfamily protein 0.06 Orthogroups_2024-Update
HORVU3Hr1G105190.4 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
HORVU3Hr1G105630.7 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g71340 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
MA_10266495g0010 No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.07 Orthogroups_2024-Update
MA_10337257g0010 No alias (p49237|e13b_maize : 232.0) Glucan... 0.05 Orthogroups_2024-Update
MA_10432716g0010 No alias (p49237|e13b_maize : 235.0) Glucan... 0.08 Orthogroups_2024-Update
MA_10432716g0030 No alias (p49237|e13b_maize : 223.0) Glucan... 0.07 Orthogroups_2024-Update
MA_28098g0010 No alias (p23546|e13e_tobac : 267.0) Glucan... 0.03 Orthogroups_2024-Update
MA_475809g0010 No alias (at4g16260 : 249.0) Glycosyl hydrolase superfamily... 0.05 Orthogroups_2024-Update
MA_556757g0010 No alias (p49237|e13b_maize : 172.0) Glucan... 0.04 Orthogroups_2024-Update
MA_795943g0010 No alias (p49237|e13b_maize : 198.0) Glucan... 0.05 Orthogroups_2024-Update
MA_8691g0010 No alias (at4g16260 : 293.0) Glycosyl hydrolase superfamily... 0.06 Orthogroups_2024-Update
PSME_00023820-RA No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.04 Orthogroups_2024-Update
Potri.006G048100 No alias beta-1,3-glucanase 1 0.05 Orthogroups_2024-Update
Potri.010G142800 No alias Glycosyl hydrolase superfamily protein 0.07 Orthogroups_2024-Update
Seita.5G448500.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G421700.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.003G422000.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.008G146700.1 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
Sobic.009G183400.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc01g008620 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 0.02 Orthogroups_2024-Update
Solyc04g016470 No alias LEQA L.esculentum TomQ'a beta(1,3)glucanase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 30 342
No external refs found!