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Description : (at3g55580 : 283.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G53830.1); Has 20178 Blast hits to 6212 proteins in 476 species: Archae - 78; Bacteria - 2696; Metazoa - 7040; Fungi - 1181; Plants - 2975; Viruses - 2; Other Eukaryotes - 6206 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description)
Gene families : OG_42_0004022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00017939-RA | |
| Cluster | HCCA clusters: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_05912 | No alias | ultraviolet-b receptor uvr8 | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G250700 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.07G136500 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.11G223000 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.14G066000 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G034600 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.18G187100 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.04 | Orthogroups_2024-Update | |
| LOC_Os05g38270 | No alias | regulator of chromosome condensation, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.008G059800 | No alias | Regulator of chromosome condensation (RCC1) family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s10_408V6 | No alias | contains ESTs... | 0.02 | Orthogroups_2024-Update | |
| Pp1s137_152V6 | No alias | contains ESTs... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predicted GO |
| BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| BP | GO:0009415 | response to water | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |