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  5. PSME_00018753-RA

PSME_00018753-RA


Description : (at4g19970 : 396.0) CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 792.0) & (original description: no original description)


Gene families : OG_42_0000198 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018753-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Bradi1g76460 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
Bradi2g58994 No alias Nucleotide-diphospho-sugar transferase family protein 0.02 Orthogroups_2024-Update
Bradi3g41140 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
Brara.A01081.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.20G006100 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
Glyma.20G109100 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G094320.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G121570.9 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g69140 No alias regulatory protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g19444 No alias regulatory protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10427674g0020 No alias (at4g19970 : 135.0) CONTAINS InterPro DOMAIN/s:... 0.04 Orthogroups_2024-Update
MA_10433997g0010 No alias (at4g19970 : 288.0) CONTAINS InterPro DOMAIN/s:... 0.04 Orthogroups_2024-Update
MA_373999g0010 No alias (at4g19970 : 275.0) CONTAINS InterPro DOMAIN/s:... 0.03 Orthogroups_2024-Update
MA_386090g0010 No alias (at4g19970 : 271.0) CONTAINS InterPro DOMAIN/s:... 0.04 Orthogroups_2024-Update
MA_8135787g0010 No alias (at1g14590 : 293.0) Nucleotide-diphospho-sugar... 0.04 Orthogroups_2024-Update
PSME_00011548-RA No alias (at4g19970 : 530.0) CONTAINS InterPro DOMAIN/s:... 0.07 Orthogroups_2024-Update
PSME_00015176-RA No alias (at4g19970 : 427.0) CONTAINS InterPro DOMAIN/s:... 0.03 Orthogroups_2024-Update
PSME_00026717-RA No alias (at5g44820 : 275.0) Nucleotide-diphospho-sugar... 0.06 Orthogroups_2024-Update
Potri.002G139800 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
Seita.2G265100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g024980 No alias Nucleotide-diphospho-sugar transferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 3 130
IPR005069 Nucl-diP-sugar_transferase 297 494
No external refs found!