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  5. PSME_00019388-RA

PSME_00019388-RA


Description : (at3g12390 : 186.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)


Gene families : OG_42_0001317 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019388-RA
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
102471 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.06 Orthogroups_2024-Update
A4A49_15023 No alias nascent polypeptide-associated complex subunit... 0.03 Orthogroups_2024-Update
A4A49_22902 No alias nascent polypeptide-associated complex subunit... 0.05 Orthogroups_2024-Update
Bradi1g62360 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.05 Orthogroups_2024-Update
Bradi2g27190 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.05 Orthogroups_2024-Update
Brara.A03346.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Brara.C03410.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Brara.G01079.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Glyma.03G120900 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.02 Orthogroups_2024-Update
Glyma.04G227300 No alias nascent polypeptide-associated complex subunit... 0.03 Orthogroups_2024-Update
Glyma.06G137800 No alias nascent polypeptide-associated complex subunit... 0.04 Orthogroups_2024-Update
HORVU1Hr1G057970.2 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
LOC_Os05g31000 No alias nascent polypeptide-associated complex subunit alpha,... 0.04 Orthogroups_2024-Update
MA_10432925g0010 No alias (at3g12390 : 220.0) Nascent polypeptide-associated... 0.03 Orthogroups_2024-Update
Pp1s10_319V6 No alias T2E22.29; nascent polypeptide associated complex alpha... 0.06 Orthogroups_2024-Update
Pp1s122_100V6 No alias nascent polypeptide associated complex alpha chain 0.13 Orthogroups_2024-Update
Pp1s156_120V6 No alias T2E22.29; nascent polypeptide associated complex alpha... 0.02 Orthogroups_2024-Update
Pp1s539_1V6 No alias nascent polypeptide associated complex alpha chain 0.02 Orthogroups_2024-Update
Seita.9G403300.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.06 Orthogroups_2024-Update
Sobic.001G371400.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.07 Orthogroups_2024-Update
Sobic.007G192700.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.08 Orthogroups_2024-Update
Solyc03g080160 No alias Nascent polypeptide associated complex alpha subunit,... 0.04 Orthogroups_2024-Update
Solyc10g081030 No alias Nascent polypeptide-associated complex subunit... 0.04 Orthogroups_2024-Update
Sopen03g021890 No alias NAC domain 0.08 Orthogroups_2024-Update
Sopen10g031540 No alias NAC domain 0.05 Orthogroups_2024-Update
evm.model.contig_4451.2 No alias (at3g49470 : 132.0) nascent polypeptide-associated... 0.12 Orthogroups_2024-Update
evm.model.tig00000842.56 No alias (at5g13850 : 196.0) nascent polypeptide-associated... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 262 317
No external refs found!