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  5. PSME_00019982-RA

PSME_00019982-RA


Description : (p07979|gub_nicpl : 308.0) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g16260 : 292.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 584.0) & (original description: no original description)


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00019982-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_01055 No alias glucan endo-1,3-beta-glucosidase, acidic isoform gi9 0.04 Orthogroups_2024-Update
A4A49_28305 No alias glucan endo-1,3-beta-glucosidase, basic vacuolar isoform ggib50 0.03 Orthogroups_2024-Update
At3g57260 No alias Beta-1,3-glucanase 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMG6] 0.04 Orthogroups_2024-Update
Bradi2g43056 No alias beta-1,3-glucanase 1 0.06 Orthogroups_2024-Update
Bradi2g60490 No alias Glycosyl hydrolase superfamily protein 0.05 Orthogroups_2024-Update
Brara.A01922.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.J01566.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
GRMZM2G065585 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G123107 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Glyma.11G095100 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G134700 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G105620.3 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
HORVU3Hr1G105630.7 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g51570 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g71340 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.04 Orthogroups_2024-Update
MA_10266495g0010 No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.06 Orthogroups_2024-Update
MA_10337257g0010 No alias (p49237|e13b_maize : 232.0) Glucan... 0.04 Orthogroups_2024-Update
MA_10432716g0010 No alias (p49237|e13b_maize : 235.0) Glucan... 0.06 Orthogroups_2024-Update
MA_10432716g0030 No alias (p49237|e13b_maize : 223.0) Glucan... 0.03 Orthogroups_2024-Update
MA_202096g0010 No alias (at4g16260 : 288.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
MA_28098g0010 No alias (p23546|e13e_tobac : 267.0) Glucan... 0.04 Orthogroups_2024-Update
MA_475809g0010 No alias (at4g16260 : 249.0) Glycosyl hydrolase superfamily... 0.04 Orthogroups_2024-Update
MA_795943g0010 No alias (p49237|e13b_maize : 198.0) Glucan... 0.04 Orthogroups_2024-Update
MA_8691g0010 No alias (at4g16260 : 293.0) Glycosyl hydrolase superfamily... 0.05 Orthogroups_2024-Update
MA_934111g0010 No alias (p49237|e13b_maize : 195.0) Glucan... 0.03 Orthogroups_2024-Update
Mp2g12240.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
Mp2g14720.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 Orthogroups_2024-Update
Mp7g13150.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Orthogroups_2024-Update
PSME_00019983-RA No alias (p07979|gub_nicpl : 267.0) Lichenase precursor (EC... 0.03 Orthogroups_2024-Update
PSME_00023820-RA No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.06 Orthogroups_2024-Update
Potri.002G089200 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G142800 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G057600 No alias beta-1,3-glucanase 1 0.04 Orthogroups_2024-Update
Seita.5G448000.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Seita.5G448500.1 No alias EC_3.2 glycosylase 0.08 Orthogroups_2024-Update
Seita.5G448800.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G421700.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.003G422000.1 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
Sobic.003G422100.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.008G146700.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc01g059980 No alias Beta-1,3-glucanase (AHRD V3.3 *** G9G7S0_HEVBR) 0.03 Orthogroups_2024-Update
Solyc01g060020 No alias beta-1,3-glucanase TOMB13GLUB 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 7 305
IPR000490 Glyco_hydro_17 327 637
No external refs found!