1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00021084-RA

PSME_00021084-RA


Description : (at5g43060 : 574.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25776|orya_orysa : 550.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 1148.0) & (original description: no original description)


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021084-RA
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
At3g19390 No alias Probable cysteine protease RD21C... 0.03 Orthogroups_2024-Update
Bradi2g39320 No alias xylem cysteine peptidase 1 0.02 Orthogroups_2024-Update
Mp8g12950.1 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Potri.005G232900 No alias xylem bark cysteine peptidase 3 0.02 Orthogroups_2024-Update
Solyc04g082710 No alias Cysteine protease, putative (AHRD V3.3 *** B9R8S7_RICCO) 0.02 Orthogroups_2024-Update
Solyc12g094700 No alias Cysteine protease, putative (AHRD V3.3 *** B9R8S7_RICCO) 0.03 Orthogroups_2024-Update
Sopen04g036340 No alias Papain family cysteine protease 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008234 cysteine-type peptidase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 135 351
IPR013201 Prot_inhib_I29 47 104
IPR000118 Granulin 385 432
No external refs found!