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  5. PSME_00021697-RA

PSME_00021697-RA


Description : (at5g15310 : 302.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 212.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00021697-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
84369 No alias myb domain protein 97 0.04 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.02 Orthogroups_2024-Update
At2g26950 No alias Transcription factor MYB104... 0.02 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.02 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
Bradi2g37377 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.05 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
GRMZM2G069325 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G096358 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.03G221900 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.07G073000 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Glyma.10G006600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.12G066000 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Glyma.12G218200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G039200 No alias myb domain protein 120 0.02 Orthogroups_2024-Update
HORVU2Hr1G027600.2 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G081770.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G060650.6 No alias accessory protein (LMI2) of floral meristem identity control 0.02 Orthogroups_2024-Update
HORVU7Hr1G037060.3 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g49160 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50680 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10157944g0010 No alias (p20026|myb1_horvu : 261.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_1201g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
MA_223201g0010 No alias (at4g38620 : 243.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_355131g0010 No alias (at3g28910 : 186.0) transcription factor myb homologue;... 0.03 Orthogroups_2024-Update
MA_3665g0010 No alias (at5g26660 : 238.0) a MYB gene encodes a transcriptional... 0.03 Orthogroups_2024-Update
MA_460508g0010 No alias (q7xbh4|myb4_orysa : 200.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
MA_62361g0010 No alias (at1g66230 : 237.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.05 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00026136-RA No alias "(at2g47460 : 219.0) ""MYB12 belongs to subgroup 7 of... 0.04 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.04 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.06 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
PSME_00044287-RA No alias (at4g05100 : 216.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00051403-RA No alias (at1g22640 : 162.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00051767-RA No alias (at4g38620 : 243.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.003G189700 No alias myb domain protein 33 0.02 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G400600.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G181600.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G196100.1 No alias MYB class-R2R3 transcription factor 0.06 Orthogroups_2024-Update
Sobic.002G209300.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G303600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.05 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.06 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.03 Orthogroups_2024-Update
Solyc07g055000 No alias R2R3MYB transcription factor 72 0.04 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen07g003890 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_444.1 No alias (at5g02320 : 125.0) Encodes a putative c-MYB-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 153 200
IPR001005 SANT/Myb 206 251
No external refs found!