PSME_00022723-RA


Description : (p0c132|iaa30_orysa : 223.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (at3g04730 : 218.0) early auxin-induced (IAA16); indoleacetic acid-induced protein 16 (IAA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 1752 Blast hits to 1751 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1751; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022723-RA
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
At3g15540 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q2VWA2] 0.03 Orthogroups_2024-Update
At3g23030 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ54] 0.03 Orthogroups_2024-Update
At4g14550 No alias indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550] 0.02 Orthogroups_2024-Update
At4g14560 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q67YC2] 0.04 Orthogroups_2024-Update
Bradi2g33417 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
Bradi2g49420 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
Bradi3g08667 No alias indole-3-acetic acid inducible 18 0.02 Orthogroups_2024-Update
Brara.C03613.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Brara.E01064.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
Glyma.02G142500 No alias indole-3-acetic acid 7 0.03 Orthogroups_2024-Update
Glyma.03G158600 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.03G158700 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
Glyma.08G203100 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.09G193000 No alias phytochrome-associated protein 2 0.02 Orthogroups_2024-Update
Glyma.10G180000 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.10G180100 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
Glyma.15G017500 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.19G161100 No alias indole-3-acetic acid inducible 14 0.02 Orthogroups_2024-Update
Glyma.20G210400 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
HORVU5Hr1G093640.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
LOC_Os01g08320 No alias OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
Potri.006G236200 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
Potri.008G161100 No alias AUX/IAA transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Seita.5G134600.1 No alias transcriptional repressor *(IAA/AUX) 0.05 Orthogroups_2024-Update
Seita.5G268600.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sobic.008G156900.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
Sobic.008G157000.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sobic.009G085100.2 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc06g053830 No alias auxin-regulated IAA7 0.03 Orthogroups_2024-Update
Sopen06g018950 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen06g018970 No alias AUX/IAA family 0.04 Orthogroups_2024-Update
Sopen09g027640 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen09g032200 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen12g003200 No alias AUX/IAA family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 15 155
IPR033389 AUX/IAA_dom 168 327
No external refs found!