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  5. PSME_00022892-RA

PSME_00022892-RA


Description : (at1g69550 : 93.6) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00022892-RA
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
MA_10428235g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012314-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00012637-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00014666-RA No alias (at1g69550 : 257.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00016728-RA No alias (at1g69550 : 234.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00019336-RA No alias (at1g69550 : 183.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00028282-RA No alias (at1g69550 : 219.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035584-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00038511-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00038789-RA No alias (at1g69550 : 138.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00052649-RA No alias (at1g69550 : 417.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00053001-RA No alias (at1g69550 : 147.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00054818-RA No alias (at1g69550 : 181.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00055013-RA No alias (at1g69550 : 137.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00055796-RA No alias (at1g69550 : 228.0) disease resistance protein... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!