Description : (at5g64570 : 870.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 452.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 1740.0) & (original description: no original description)
Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00023147-RA | |
Cluster | HCCA clusters: Cluster_148 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
112087 | No alias | Glycosyl hydrolase family protein | 0.02 | Orthogroups_2024-Update | |
419541 | No alias | Glycosyl hydrolase family protein | 0.02 | Orthogroups_2024-Update | |
A4A49_15163 | No alias | putative beta-d-xylosidase 7 | 0.02 | Orthogroups_2024-Update | |
A4A49_17457 | No alias | beta-d-xylosidase 1 | 0.02 | Orthogroups_2024-Update | |
At1g02640 | No alias | Probable beta-D-xylosidase 2... | 0.03 | Orthogroups_2024-Update | |
At5g49360 | No alias | Beta-D-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY1] | 0.03 | Orthogroups_2024-Update | |
Bradi4g20240 | No alias | Glycosyl hydrolase family protein | 0.02 | Orthogroups_2024-Update | |
Brara.B03487.1 | No alias | bifunctional alpha-L-arabinofuranosidase and... | 0.03 | Orthogroups_2024-Update | |
Brara.F02936.1 | No alias | bifunctional alpha-L-arabinofuranosidase and... | 0.04 | Orthogroups_2024-Update | |
Brara.J00119.1 | No alias | bifunctional alpha-L-arabinofuranosidase and... | 0.04 | Orthogroups_2024-Update | |
Glyma.09G038600 | No alias | beta-xylosidase 1 | 0.02 | Orthogroups_2024-Update | |
LOC_Os04g54810 | No alias | beta-D-xylosidase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_102349g0010 | No alias | (at5g64570 : 473.0) Encodes a beta-d-xylosidase that... | 0.03 | Orthogroups_2024-Update | |
PSME_00030271-RA | No alias | (at5g64570 : 933.0) Encodes a beta-d-xylosidase that... | 0.03 | Orthogroups_2024-Update | |
Potri.002G093900 | No alias | Glycosyl hydrolase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.014G122200 | No alias | beta-xylosidase 2 | 0.03 | Orthogroups_2024-Update | |
Pp1s196_21V6 | No alias | periplasmic beta-glucosidase | 0.02 | Orthogroups_2024-Update | |
Seita.8G230000.1 | No alias | bifunctional alpha-L-arabinofuranosidase and... | 0.02 | Orthogroups_2024-Update | |
Sopen01g031350 | No alias | Glycosyl hydrolase family 3 N terminal domain | 0.02 | Orthogroups_2024-Update | |
Sopen04g029010 | No alias | Glycosyl hydrolase family 3 N terminal domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | Predicted GO |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0005319 | lipid transporter activity | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006869 | lipid transport | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Predicted GO |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Predicted GO |
BP | GO:0061024 | membrane organization | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
BP | GO:0120009 | intermembrane lipid transfer | IEP | Predicted GO |
MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Predicted GO |
No external refs found! |