PSME_00023360-RA

Description : (p35694|bru1_soybn : 312.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at5g13870 : 304.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00023360-RA
Cluster	HCCA clusters: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
119243	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
A4A49_30032	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.03	Orthogroups_2024-Update
A4A49_34196	No alias	putative xyloglucan endotransglucosylasehydrolase protein 23	0.03	Orthogroups_2024-Update
A4A49_36014	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.03	Orthogroups_2024-Update
A4A49_37338	No alias	xyloglucan endotransglucosylasehydrolase protein 15	0.04	Orthogroups_2024-Update
At1g10550	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.07	Orthogroups_2024-Update
At4g14130	No alias	Xyloglucan endotransglucosylase/hydrolase protein 15...	0.03	Orthogroups_2024-Update
Bradi1g27867	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.03	Orthogroups_2024-Update
Bradi1g33810	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.04	Orthogroups_2024-Update
Brara.F02444.1	No alias	EC_2.4 glycosyltransferase	0.05	Orthogroups_2024-Update
GRMZM2G392125	No alias	xyloglucan endotransglucosylase/hydrolase 24	0.04	Orthogroups_2024-Update
Glyma.12G080100	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.02	Orthogroups_2024-Update
Glyma.18G106500	No alias	xyloglucan endotransglucosylase/hydrolase 15	0.03	Orthogroups_2024-Update
LOC_Os06g48170	No alias	glycosyl hydrolases family 16, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g29750	No alias	glycosyl hydrolases family 16, putative, expressed	0.03	Orthogroups_2024-Update
MA_10434153g0020	No alias	(q41638\|xtha_phaan : 378.0) Xyloglucan...	0.02	Orthogroups_2024-Update
MA_328340g0010	No alias	(at4g03210 : 285.0) encodes a member of xyloglucan...	0.04	Orthogroups_2024-Update
MA_781557g0010	No alias	(at5g13870 : 271.0) EXGT-A4, endoxyloglucan...	0.02	Orthogroups_2024-Update
MA_894023g0010	No alias	(at5g13870 : 233.0) EXGT-A4, endoxyloglucan...	0.04	Orthogroups_2024-Update
MA_96657g0010	No alias	(at5g57550 : 317.0) xyloglucan...	0.03	Orthogroups_2024-Update
Mp4g00700.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
PSME_00000084-RA	No alias	(at2g36870 : 349.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00019699-RA	No alias	(q39857\|xth_soybn : 456.0) Probable xyloglucan...	0.09	Orthogroups_2024-Update
PSME_00022999-RA	No alias	(at5g57530 : 289.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00033686-RA	No alias	(at2g36870 : 309.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00035710-RA	No alias	(at2g36870 : 291.0) xyloglucan...	0.06	Orthogroups_2024-Update
PSME_00039728-RA	No alias	(q39857\|xth_soybn : 318.0) Probable xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00040047-RA	No alias	(at2g36870 : 242.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00045375-RA	No alias	(p93349\|xth_tobac : 273.0) Probable xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00047561-RA	No alias	(at2g36870 : 281.0) xyloglucan...	0.07	Orthogroups_2024-Update
PSME_00050857-RA	No alias	(q41638\|xtha_phaan : 372.0) Xyloglucan...	0.03	Orthogroups_2024-Update
Potri.006G122900	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.03	Orthogroups_2024-Update
Potri.011G077300	No alias	xyloglucan endotransglucosylase/hydrolase 16	0.02	Orthogroups_2024-Update
Pp1s11_339V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Pp1s195_28V6	No alias	xyloglucan endotransglycosylase	0.02	Orthogroups_2024-Update
Pp1s272_49V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Pp1s309_41V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Pp1s410_28V6	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Pp1s618_1V6	No alias	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.03	Orthogroups_2024-Update
Seita.4G246400.1	No alias	EC_2.4 glycosyltransferase	0.04	Orthogroups_2024-Update
Seita.7G250500.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Sobic.001G309000.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.04	Orthogroups_2024-Update
Sobic.001G538000.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.02	Orthogroups_2024-Update
Sobic.010G246600.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Solyc03g093110	No alias	xyloglucan endotransglucosylase-hydrolase	0.04	Orthogroups_2024-Update
Solyc07g006860	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc11g065600	No alias	xyloglucan endotransglucosylase-hydrolase 4	0.03	Orthogroups_2024-Update
Solyc12g007250	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Sopen07g026530	No alias	Glycosyl hydrolases family 16	0.03	Orthogroups_2024-Update
Sopen09g003140	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predicted GO
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Predicted GO
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
MF	GO:0008066	glutamate receptor activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022835	transmitter-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO
MF	GO:0030594	neurotransmitter receptor activity	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
MF	GO:0038023	signaling receptor activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0060089	molecular transducer activity	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010713	XET_C	235	271
IPR000757	GH16	29	207

External Links

No external refs found!

PSME_00023360-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation