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  5. PSME_00024247-RA

PSME_00024247-RA


Description : (at1g64060 : 902.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 1804.0) & (original description: no original description)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00024247-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
183259 No alias respiratory burst oxidase protein F 0.02 Orthogroups_2024-Update
235874 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
266977 No alias respiratory burst oxidase protein F 0.04 Orthogroups_2024-Update
A4A49_15438 No alias respiratory burst oxidase-like protein e 0.02 Orthogroups_2024-Update
At1g19230 No alias Respiratory burst oxidase homolog protein E... 0.03 Orthogroups_2024-Update
Cre03.g188300 No alias Riboflavin synthase-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G089291 No alias respiratory burst oxidase protein F 0.02 Orthogroups_2024-Update
GRMZM2G401179 No alias ferric reductase-like transmembrane component family protein 0.05 Orthogroups_2024-Update
Glyma.05G212500 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
Glyma.17G078300 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
HORVU3Hr1G069780.1 No alias respiratory burst NADPH oxidase *(SGN4) & NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Kfl00600_0020 kfl00600_0020_v1.1 (at4g25090 : 239.0) Riboflavin synthase-like superfamily... 0.01 Orthogroups_2024-Update
LOC_Os12g35610 No alias respiratory burst oxidase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00025624-RA No alias (at5g47910 : 1079.0) NADPH/respiratory burst oxidase... 0.02 Orthogroups_2024-Update
Pp1s241_44V6 No alias respiratory burst 0.02 Orthogroups_2024-Update
Seita.8G184400.1 No alias NADPH-oxidase *(Rboh) 0.04 Orthogroups_2024-Update
Sobic.008G118700.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Solyc07g042460 No alias Respiratory burst oxidase, putative (AHRD V3.3 *** B9RR53_RICCO) 0.04 Orthogroups_2024-Update
Sopen03g036880 No alias Ferric reductase NAD binding domain 0.02 Orthogroups_2024-Update
Sopen06g025960 No alias Ferric reductase NAD binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013130 Fe3_Rdtase_TM_dom 406 562
IPR013121 Fe_red_NAD-bd_6 732 914
IPR013112 FAD-bd_8 605 725
IPR013623 NADPH_Ox 145 247
No external refs found!