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Description : (at2g40410 : 372.0) Staphylococcal nuclease homologue; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nuclease activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071); BEST Arabidopsis thaliana protein match is: Ca-2+ dependent nuclease (TAIR:AT3G56170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 744.0) & (original description: no original description)
Gene families : OG_42_0003062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003062_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00024526-RA | |
| Cluster | HCCA clusters: Cluster_157 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0007050 | cell cycle arrest | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016071 | Staphylococal_nuclease_OB-fold | 223 | 317 |
| No external refs found! |