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  5. PSME_00025105-RA

PSME_00025105-RA


Description : (at1g80760 : 287.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (q6z2t3|lsi1_orysa : 204.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (reliability: 574.0) & (original description: no original description)


Gene families : OG_42_0000209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025105-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Brara.C02640.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.02 Orthogroups_2024-Update
Glyma.05G162600 No alias NOD26-like intrinsic protein 1;2 0.05 Orthogroups_2024-Update
Glyma.08G120200 No alias NOD26-like intrinsic protein 1;2 0.05 Orthogroups_2024-Update
Glyma.15G003900 No alias NOD26-like intrinsic protein 6;1 0.02 Orthogroups_2024-Update
Glyma.18G259500 No alias NOD26-like intrinsic protein 4;2 0.03 Orthogroups_2024-Update
HORVU1Hr1G047100.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.04 Orthogroups_2024-Update
HORVU7Hr1G038220.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.03 Orthogroups_2024-Update
HORVU7Hr1G038270.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.03 Orthogroups_2024-Update
LOC_Os08g05600 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g36924 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00025106-RA No alias (at1g80760 : 300.0) Encodes a protein with boron... 0.03 Orthogroups_2024-Update
PSME_00043798-RA No alias (at4g18910 : 219.0) Encodes an aquaporin homolog.... 0.04 Orthogroups_2024-Update
PSME_00046543-RA No alias (at4g18910 : 279.0) Encodes an aquaporin homolog.... 0.03 Orthogroups_2024-Update
Potri.008G203300 No alias NOD26-like intrinsic protein 7;1 0.03 Orthogroups_2024-Update
Seita.3G073300.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.03 Orthogroups_2024-Update
Solyc02g063310 No alias LOW QUALITY:NOD26-like intrinsic protein 4.3 0.02 Orthogroups_2024-Update
Solyc08g013730 No alias NOD26-like intrinsic protein5.1 0.06 Orthogroups_2024-Update
Sopen03g010220 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update
evm.model.contig_2262.1 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 67 277
No external refs found!