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  5. PSME_00025222-RA

PSME_00025222-RA


Description : (at5g25610 : 92.4) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description)


Gene families : OG_42_0000366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025222-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g12410 No alias BURP domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g12640 No alias BURP domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10429742g0010 No alias (at1g70370 : 87.4) polygalacturonase 2 (PG2); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00025223-RA No alias (at1g23760 : 93.6) Encodes aromatic rich glycoprotein... 0.1 Orthogroups_2024-Update
PSME_00040212-RA No alias (at1g70370 : 99.4) polygalacturonase 2 (PG2); FUNCTIONS... 0.05 Orthogroups_2024-Update
Pp1s374_47V6 No alias Polygalacturonase non-catalytic subunit AroGP3 precursor... 0.02 Orthogroups_2024-Update
Seita.8G155000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G287000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g109470 No alias Dehydration-responsive protein RD22, putative (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 104 286
No external refs found!