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Description : (at5g57250 : 368.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 71706 Blast hits to 14592 proteins in 301 species: Archae - 6; Bacteria - 54; Metazoa - 648; Fungi - 890; Plants - 68117; Viruses - 0; Other Eukaryotes - 1991 (source: NCBI BLink). & (q76c99|rf1_orysa : 285.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 736.0) & (original description: no original description)
Gene families : OG_42_0006661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006661_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00025467-RA | |
| Cluster | HCCA clusters: Cluster_89 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
| CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 782 | 813 |
| IPR002885 | Pentatricopeptide_repeat | 452 | 484 |
| IPR002885 | Pentatricopeptide_repeat | 8 | 57 |
| IPR002885 | Pentatricopeptide_repeat | 247 | 295 |
| IPR002885 | Pentatricopeptide_repeat | 936 | 972 |
| IPR002885 | Pentatricopeptide_repeat | 317 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 435 |
| IPR002885 | Pentatricopeptide_repeat | 716 | 765 |
| IPR002885 | Pentatricopeptide_repeat | 646 | 695 |
| IPR002885 | Pentatricopeptide_repeat | 151 | 197 |
| IPR002885 | Pentatricopeptide_repeat | 78 | 127 |
| IPR002885 | Pentatricopeptide_repeat | 491 | 542 |
| IPR002885 | Pentatricopeptide_repeat | 220 | 244 |
| IPR002885 | Pentatricopeptide_repeat | 567 | 596 |
| IPR002885 | Pentatricopeptide_repeat | 619 | 643 |
| No external refs found! |