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  5. Sopen05g034640

Sopen05g034640


Description : tRNA synthetases class II (D, K and N)


Gene families : OG_42_0003306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g034640
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
At4g31180 No alias Aspartate--tRNA ligase 2, cytoplasmic... 0.03 Orthogroups_2024-Update
Cre06.g279150 No alias Class II aminoacyl-tRNA and biotin synthetases... 0.01 Orthogroups_2024-Update
HORVU5Hr1G050160.1 No alias EC_6.1 ligase forming carbon-oxygen bond & aspartate-tRNA ligase 0.02 Orthogroups_2024-Update
Mp4g09670.1 No alias aspartate-tRNA ligase 0.02 Orthogroups_2024-Update
Solyc05g056250 No alias Aspartate--tRNA ligase (AHRD V3.3 *** A0A0K9PY91_ZOSMR) 0.04 Orthogroups_2024-Update
evm.model.tig00000865.32 No alias (at4g26870 : 307.0) Class II aminoacyl-tRNA and biotin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 219 538
IPR004365 NA-bd_OB_tRNA 96 180
No external refs found!