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  5. PSME_00027175-RA

PSME_00027175-RA


Description : (at4g11820 : 573.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 1146.0) & (original description: no original description)


Gene families : OG_42_0002432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002432_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027175-RA
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
A4A49_31763 No alias hydroxymethylglutaryl-coa synthase 0.02 Orthogroups_2024-Update
Glyma.01G215500 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.03 Orthogroups_2024-Update
Potri.001G111700 No alias hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /... 0.03 Orthogroups_2024-Update
Solyc08g080170 No alias Hydroxymethylglutaryl-CoA synthase, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEA InterProScan predictions
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013746 HMG_CoA_synt_C_dom 209 379
IPR013528 HMG_CoA_synth_N 35 208
No external refs found!