PSME_00027576-RA

Description : (at4g23140 : 438.0) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 119608 Blast hits to 118061 proteins in 4543 species: Archae - 108; Bacteria - 13357; Metazoa - 44377; Fungi - 10093; Plants - 34036; Viruses - 376; Other Eukaryotes - 17261 (source: NCBI BLink). & (q8lkz1|nork_pea : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 876.0) & (original description: no original description)

Gene families : OG_42_0000062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00027576-RA
Cluster	HCCA clusters: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g25497	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.03	Orthogroups_2024-Update
Bradi1g25564	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.04	Orthogroups_2024-Update
Bradi1g25657	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.03	Orthogroups_2024-Update
Bradi1g42458	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.02	Orthogroups_2024-Update
Bradi4g29930	No alias	Protein kinase superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g23120	No alias	S-locus lectin protein kinase family protein	0.03	Orthogroups_2024-Update
Brara.A01326.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Brara.C04658.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Brara.C04659.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
GRMZM2G140752	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.03	Orthogroups_2024-Update
Glyma.10G254300	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.02	Orthogroups_2024-Update
Glyma.20G137300	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 26	0.05	Orthogroups_2024-Update
HORVU1Hr1G001220.3	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.04	Orthogroups_2024-Update
HORVU2Hr1G044600.19	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU2Hr1G044640.4	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
HORVU5Hr1G061150.2	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
HORVU6Hr1G069710.4	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
LOC_Os04g54190	No alias	cysteine-rich receptor-like protein kinase 8 precursor,...	0.02	Orthogroups_2024-Update
LOC_Os07g35810	No alias	TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
LOC_Os07g43560	No alias	TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
LOC_Os07g43570	No alias	TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
MA_104192g0010	No alias	(at4g23280 : 375.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
MA_10430478g0010	No alias	(at4g21390 : 318.0) B120; FUNCTIONS IN: protein...	0.03	Orthogroups_2024-Update
MA_10432964g0020	No alias	(at4g23180 : 306.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
MA_18132g0010	No alias	(at4g23180 : 295.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
MA_212168g0010	No alias	(at4g23190 : 290.0) Encodes putative receptor-like...	0.03	Orthogroups_2024-Update
MA_285982g0010	No alias	(at1g70740 : 230.0) Protein kinase superfamily protein;...	0.03	Orthogroups_2024-Update
MA_28683g0010	No alias	(at4g23160 : 349.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
MA_35233g0010	No alias	(at3g22060 : 103.0) contains Pfam profile: PF01657...	0.03	Orthogroups_2024-Update
MA_6464638g0010	No alias	(at1g70740 : 273.0) Protein kinase superfamily protein;...	0.04	Orthogroups_2024-Update
MA_9861293g0010	No alias	(at1g70740 : 274.0) Protein kinase superfamily protein;...	0.05	Orthogroups_2024-Update
PSME_00011850-RA	No alias	(at4g23180 : 410.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00012848-RA	No alias	(at4g23250 : 424.0) EMBRYO DEFECTIVE 1290 (EMB1290);...	0.05	Orthogroups_2024-Update
PSME_00013470-RA	No alias	(at4g23180 : 434.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00015154-RA	No alias	(at4g23180 : 417.0) Encodes a receptor-like protein...	0.08	Orthogroups_2024-Update
PSME_00015346-RA	No alias	(at4g23180 : 367.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00024311-RA	No alias	(at4g23180 : 456.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00029944-RA	No alias	(at4g23180 : 435.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00031014-RA	No alias	(at4g23180 : 425.0) Encodes a receptor-like protein...	0.02	Orthogroups_2024-Update
PSME_00039295-RA	No alias	(at4g23160 : 364.0) Encodes a cysteine-rich...	0.05	Orthogroups_2024-Update
PSME_00040303-RA	No alias	(at4g23180 : 466.0) Encodes a receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00040389-RA	No alias	(at4g23150 : 443.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
PSME_00042074-RA	No alias	(at4g23160 : 445.0) Encodes a cysteine-rich...	0.05	Orthogroups_2024-Update
PSME_00043466-RA	No alias	(at4g23160 : 326.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
PSME_00043553-RA	No alias	(at4g23180 : 435.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00044065-RA	No alias	(at4g05200 : 412.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
Potri.011G030300	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.03	Orthogroups_2024-Update
Potri.T128700	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.03	Orthogroups_2024-Update
Seita.1G293100.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.009G082200.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sopen02g024790	No alias	Protein tyrosine kinase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Predicted GO
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
CC	GO:0044448	cell cortex part	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	348	549
IPR002902	GNK2	153	244
IPR002902	GNK2	39	132

External Links

No external refs found!

PSME_00027576-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation