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  5. PSME_00028077-RA

PSME_00028077-RA


Description : (at5g39660 : 211.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 98.6) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 422.0) & (original description: no original description)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028077-RA
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
A4A49_12086 No alias cyclic dof factor 2 0.05 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.03 Orthogroups_2024-Update
A4A49_23576 No alias dof zinc finger protein dof5.4 0.03 Orthogroups_2024-Update
A4A49_24184 No alias dof zinc finger protein dof3.1 0.03 Orthogroups_2024-Update
A4A49_35213 No alias dof zinc finger protein dof1.7 0.04 Orthogroups_2024-Update
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.04 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.04 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.03 Orthogroups_2024-Update
At3g50410 No alias OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5] 0.03 Orthogroups_2024-Update
At4g00940 No alias Dof zinc finger protein DOF4.1... 0.02 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.04 Orthogroups_2024-Update
At5g60850 No alias OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84] 0.03 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.03 Orthogroups_2024-Update
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Brara.B00052.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.F01530.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F02426.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I00633.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.J01378.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
GRMZM2G089949 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
GRMZM2G123900 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM5G880268 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.08G228900 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
Glyma.11G059300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G335200 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.15G039300 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.15G215500 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.19G023200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.19G257500 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g07360 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_17614g0010 No alias (at5g62940 : 138.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
Potri.004G038800 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.007G038100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Potri.016G069300 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Potri.017G084600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Pp1s118_226V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s12_364V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Pp1s170_42V6 No alias f-box family protein 0.03 Orthogroups_2024-Update
Pp1s385_53V6 No alias ascorbate oxidase promoter-binding protein aobp 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G489900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g077950 No alias Dof zinc finger protein5 0.03 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.02 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.04 Orthogroups_2024-Update
Solyc06g005130 No alias Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.04 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen02g032780 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g022580 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen04g026890 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 143 199
No external refs found!