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  5. PSME_00028806-RA

PSME_00028806-RA


Description : (at5g52060 : 226.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 452.0) & (original description: no original description)


Gene families : OG_42_0000402 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028806-RA
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
At5g07220 No alias BAG family molecular chaperone regulator 3... 0.04 Orthogroups_2024-Update
Bradi1g49537 No alias BCL-2-associated athanogene 3 0.03 Orthogroups_2024-Update
Brara.B01527.1 No alias nucleotide exchange factor *(BAG) 0.01 Orthogroups_2024-Update
HORVU2Hr1G083700.4 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g67950 No alias ubiquitin family protein, putative, expressed 0.01 Orthogroups_2024-Update
Mp6g15890.1 No alias nucleotide exchange factor (BAG) 0.02 Orthogroups_2024-Update
PSME_00003286-RA No alias (at5g52060 : 181.0) A member of Arabidopsis BAG... 0.02 Orthogroups_2024-Update
PSME_00017128-RA No alias (at1g61800 : 253.0) glucose6-Phosphate/phosphate... 0.06 Orthogroups_2024-Update
PSME_00029289-RA No alias (at5g52060 : 187.0) A member of Arabidopsis BAG... 0.08 Orthogroups_2024-Update
PSME_00036700-RA No alias (at5g52060 : 153.0) A member of Arabidopsis BAG... 0.01 Orthogroups_2024-Update
PSME_00045405-RA No alias (at5g52060 : 124.0) A member of Arabidopsis BAG... 0.08 Orthogroups_2024-Update
PSME_00055705-RA No alias (at5g52060 : 85.5) A member of Arabidopsis BAG... 0.03 Orthogroups_2024-Update
Seita.5G420300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G394400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen08g028670 No alias BAG domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0051087 chaperone binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 26 94
IPR003103 BAG_domain 120 195
No external refs found!