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  5. PSME_00028830-RA

PSME_00028830-RA


Description : (at4g14740 : 291.0) FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 582.0) & (original description: no original description)


Gene families : OG_42_0000755 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028830-RA
Cluster HCCA clusters: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
443866 No alias Plant protein of unknown function (DUF828) with plant... 0.02 Orthogroups_2024-Update
Bradi1g78487 No alias Plant protein of unknown function (DUF828) with plant... 0.03 Orthogroups_2024-Update
Glyma.04G083000 No alias Plant protein of unknown function (DUF828) with plant... 0.03 Orthogroups_2024-Update
HORVU1Hr1G056150.4 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os10g41060 No alias expressed protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013666 PH_pln 365 472
IPR008546 DUF828 42 334
No external refs found!