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  5. PSME_00029080-RA

PSME_00029080-RA


Description : (at1g67960 : 480.0) CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 960.0) & (original description: no original description)


Gene families : OG_42_0004067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029080-RA
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
A4A49_37689 No alias protein pollen defective in guidance 1 0.03 Orthogroups_2024-Update
evm.model.contig_3525.4 No alias (at1g67960 : 106.0) CONTAINS InterPro DOMAIN/s: Membrane... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR008010 Tatp1 432 712
No external refs found!