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  5. PSME_00029240-RA

PSME_00029240-RA


Description : (at4g29270 : 216.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29260.1); Has 719 Blast hits to 714 proteins in 195 species: Archae - 0; Bacteria - 324; Metazoa - 0; Fungi - 0; Plants - 383; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (p15490|vspa_soybn : 161.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 432.0) & (original description: no original description)


Gene families : OG_42_0000287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029240-RA
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g10370 No alias acid phosphatase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435570g0010 No alias (at4g29270 : 217.0) HAD superfamily, subfamily IIIB acid... 0.05 Orthogroups_2024-Update
PSME_00029239-RA No alias (at4g29270 : 210.0) HAD superfamily, subfamily IIIB acid... 0.06 Orthogroups_2024-Update
PSME_00029857-RA No alias (at4g29270 : 152.0) HAD superfamily, subfamily IIIB acid... 0.04 Orthogroups_2024-Update
PSME_00046368-RA No alias (at4g29270 : 102.0) HAD superfamily, subfamily IIIB acid... 0.04 Orthogroups_2024-Update
Solyc06g062370 No alias Acid phosphatase-like protein 1 (AHRD V3.3 *** V9MHL3_9ROSA) 0.02 Orthogroups_2024-Update
Sopen06g021870 No alias HAD superfamily, subfamily IIIB (Acid phosphatase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR005519 Acid_phosphat_B-like 37 254
No external refs found!