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  5. PSME_00029430-RA

PSME_00029430-RA


Description : (at5g47390 : 224.0) myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G16350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 448.0) & (original description: no original description)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029430-RA
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
439294 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
84280 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_04556 No alias transcription factor myb1r1 0.04 Orthogroups_2024-Update
A4A49_28792 No alias transcription factor myb1r1 0.05 Orthogroups_2024-Update
At1g19000 No alias AT1G19000 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMC7] 0.03 Orthogroups_2024-Update
At3g10580 No alias Homeodomain-like superfamily protein... 0.02 Orthogroups_2024-Update
At5g23650 No alias Homeodomain-like transcriptional regulator... 0.03 Orthogroups_2024-Update
At5g61620 No alias Probable transcription factor At5g61620... 0.02 Orthogroups_2024-Update
Bradi2g42870 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g55217 No alias Duplicated homeodomain-like superfamily protein 0.07 Orthogroups_2024-Update
Bradi3g33440 No alias myb-like transcription factor family protein 0.06 Orthogroups_2024-Update
Brara.B02978.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.E02946.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.G02453.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.06 Orthogroups_2024-Update
Brara.G03304.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.J01271.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.J02420.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Cre10.g430750 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G027914 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G013000 No alias Duplicated homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.05G032200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G175500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G019400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G134200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G019480.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
HORVU3Hr1G052710.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
LOC_Os01g09280 No alias myb-related transcription activator, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g37040 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g41260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_40234g0010 No alias (at5g47390 : 218.0) myb-like transcription factor family... 0.05 Orthogroups_2024-Update
MA_41803g0010 No alias (at5g08520 : 182.0) Duplicated homeodomain-like... 0.03 Orthogroups_2024-Update
MA_6326342g0010 No alias (at5g08520 : 120.0) Duplicated homeodomain-like... 0.04 Orthogroups_2024-Update
Mp4g22430.1 No alias transcription factor (MYB-related) 0.02 Orthogroups_2024-Update
PSME_00003776-RA No alias (at5g47390 : 201.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
PSME_00053886-RA No alias (at2g38090 : 199.0) Duplicated homeodomain-like... 0.04 Orthogroups_2024-Update
Potri.005G087700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G097300 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G076200 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G064200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G240800 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G060300 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G069000 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Seita.3G111800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Seita.5G098300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Seita.5G216800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Seita.5G385300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.05 Orthogroups_2024-Update
Seita.9G321800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Sobic.001G295600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.001G297500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G359800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Solyc11g006720 No alias MYB-like transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g008800 No alias Myb-like transcription factor family protein, putative... 0.04 Orthogroups_2024-Update
Solyc12g044610 No alias Myb transcription factor (AHRD V3.3 *** B1Q4U5_BRUGY) 0.02 Orthogroups_2024-Update
Sopen05g033680 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen06g027540 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g026840 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen09g007130 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen10g028480 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 95 139
No external refs found!