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  5. Sopen06g002470

Sopen06g002470


Description : Ribosomal protein S8e


Gene families : OG_42_0001226 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g002470
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
A4A49_00086 No alias 40s ribosomal protein s8 0.16 Orthogroups_2024-Update
A4A49_00202 No alias 40s ribosomal protein s8 0.17 Orthogroups_2024-Update
A4A49_17431 No alias 40s ribosomal protein s8 0.13 Orthogroups_2024-Update
A4A49_61985 No alias 40s ribosomal protein s8 0.05 Orthogroups_2024-Update
A4A49_62566 No alias 40s ribosomal protein s8 0.11 Orthogroups_2024-Update
Bradi1g51357 No alias Ribosomal protein S8e family protein 0.18 Orthogroups_2024-Update
Bradi3g43560 No alias Ribosomal protein S8e family protein 0.18 Orthogroups_2024-Update
Brara.B00878.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
Brara.C00929.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.26 Orthogroups_2024-Update
Brara.J01583.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.3 Orthogroups_2024-Update
Cre06.g272800 No alias Ribosomal protein S8e family protein 0.23 Orthogroups_2024-Update
GRMZM2G030228 No alias Ribosomal protein S8e family protein 0.14 Orthogroups_2024-Update
GRMZM2G336875 No alias Ribosomal protein S8e family protein 0.05 Orthogroups_2024-Update
Glyma.03G086400 No alias Ribosomal protein S8e family protein 0.14 Orthogroups_2024-Update
Glyma.08G325000 No alias Ribosomal protein S8e family protein 0.04 Orthogroups_2024-Update
Glyma.08G346500 No alias Ribosomal protein S8e family protein 0.09 Orthogroups_2024-Update
Glyma.16G087700 No alias Ribosomal protein S8e family protein 0.15 Orthogroups_2024-Update
Glyma.18G157300 No alias Ribosomal protein S8e family protein 0.17 Orthogroups_2024-Update
HORVU2Hr1G067370.5 No alias Unknown function 0.12 Orthogroups_2024-Update
Kfl00279_0040 kfl00279_0040_v1.1 (p49199|rs8_orysa : 268.0) 40S ribosomal protein S8 -... 0.1 Orthogroups_2024-Update
LOC_Os02g28810 No alias ribosomal protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g28180 No alias ribosomal protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_14571g0010 No alias (p49199|rs8_orysa : 265.0) 40S ribosomal protein S8 -... 0.03 Orthogroups_2024-Update
MA_9738483g0010 No alias (p49199|rs8_orysa : 198.0) 40S ribosomal protein S8 -... 0.03 Orthogroups_2024-Update
Mp2g16300.1 No alias component RPS8 of SSU proteome 0.17 Orthogroups_2024-Update
PSME_00001605-RA No alias (q08069|rs8_maize : 279.0) 40S ribosomal protein S8 -... 0.08 Orthogroups_2024-Update
Potri.001G262100 No alias Ribosomal protein S8e family protein 0.09 Orthogroups_2024-Update
Potri.009G056900 No alias Ribosomal protein S8e family protein 0.11 Orthogroups_2024-Update
Potri.017G110000 No alias Ribosomal protein S8e family protein 0.06 Orthogroups_2024-Update
Pp1s162_83V6 No alias 40s ribosomal protein 0.21 Orthogroups_2024-Update
Pp1s223_73V6 No alias 40s ribosomal protein 0.13 Orthogroups_2024-Update
Pp1s227_85V6 No alias 40s ribosomal protein 0.16 Orthogroups_2024-Update
Pp1s292_14V6 No alias 40s ribosomal protein 0.29 Orthogroups_2024-Update
Pp1s46_183V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Seita.1G314000.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.27 Orthogroups_2024-Update
Seita.7G057900.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Sobic.004G244800.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.18 Orthogroups_2024-Update
Sobic.006G035900.1 No alias component *(eS8) of small ribosomal-subunit (SSU) proteome 0.18 Orthogroups_2024-Update
Solyc06g007570 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4C3D8_SOLLC) 0.14 Orthogroups_2024-Update
Solyc06g083180 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4CAH3_SOLLC) 0.17 Orthogroups_2024-Update
Solyc07g065170 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4CHJ6_SOLLC) 0.15 Orthogroups_2024-Update
Solyc09g057650 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4CTF6_SOLLC) 0.25 Orthogroups_2024-Update
Solyc10g006070 No alias 40S ribosomal protein S8 (AHRD V3.3 *** K4CXD9_SOLLC) 0.07 Orthogroups_2024-Update
evm.model.contig_4462.6 No alias (q08069|rs8_maize : 255.0) 40S ribosomal protein S8 -... 0.31 Orthogroups_2024-Update
evm.model.tig00020610.79 No alias (p49199|rs8_orysa : 269.0) 40S ribosomal protein S8 -... 0.16 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 1 196
No external refs found!