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  5. PSME_00030061-RA

PSME_00030061-RA


Description : (at5g26600 : 526.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 994.0) & (original description: no original description)


Gene families : OG_42_0002818 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002818_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030061-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Bradi2g11200 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update
MA_59984g0010 No alias (at3g62130 : 468.0) Pyridoxal phosphate (PLP)-dependent... 0.04 Orthogroups_2024-Update
PSME_00034152-RA No alias (at3g62130 : 110.0) Pyridoxal phosphate (PLP)-dependent... 0.04 Orthogroups_2024-Update
PSME_00054315-RA No alias (at5g26600 : 243.0) Pyridoxal phosphate (PLP)-dependent... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000192 Aminotrans_V_dom 103 308
No external refs found!