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  5. PSME_00030115-RA

PSME_00030115-RA


Description : (at1g09560 : 257.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (q9s8p4|rhre_pea : 229.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (reliability: 514.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030115-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
109970 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
A4A49_64273 No alias nectarin-1 0.02 Orthogroups_2024-Update
Bradi4g06080 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
Bradi5g21910 No alias RmlC-like cupins superfamily protein 0.07 Orthogroups_2024-Update
GRMZM2G115491 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G102700 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G066380.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os08g35760 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_579918g0010 No alias (q9s8p4|rhre_pea : 172.0) Rhicadhesin receptor precursor... 0.02 Orthogroups_2024-Update
PSME_00043689-RA No alias (at1g09560 : 232.0) germin-like protein (GLP5);... 0.04 Orthogroups_2024-Update
Potri.011G163800 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Pp1s82_6V6 No alias F14J9.22; germin-like protein (GLP4) (GLP5) [Arabidopsis... 0.02 Orthogroups_2024-Update
Sobic.004G148200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G065900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 68 214
No external refs found!