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  5. PSME_00030828-RA

PSME_00030828-RA


Description : (at4g26200 : 544.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (q00257|1a12_cucma : 538.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1088.0) & (original description: no original description)


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00030828-RA
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_01413 No alias 1-aminocyclopropane-1-carboxylate synthase 3 0.04 Orthogroups_2024-Update
A4A49_24774 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_28180 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_57945 No alias 1-aminocyclopropane-1-carboxylate synthase 0.04 Orthogroups_2024-Update
At3g49700 No alias 1-aminocyclopropane-1-carboxylate synthase 9... 0.03 Orthogroups_2024-Update
At4g08040 No alias 1-aminocyclopropane-1-carboxylate synthase 11... 0.04 Orthogroups_2024-Update
Brara.J00045.1 No alias EC_4.4 carbon-sulfur lyase &... 0.04 Orthogroups_2024-Update
GRMZM2G164405 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.05 Orthogroups_2024-Update
GRMZM5G894619 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.07 Orthogroups_2024-Update
Glyma.01G213700 No alias ACC synthase 10 0.03 Orthogroups_2024-Update
Glyma.06G049900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.02 Orthogroups_2024-Update
Glyma.08G018000 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.02 Orthogroups_2024-Update
Glyma.17G158100 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
LOC_Os01g09700 No alias aminotransferase, classes I and II, domain containing... 0.03 Orthogroups_2024-Update
LOC_Os03g51740 No alias aminotransferase, classes I and II, domain containing... 0.02 Orthogroups_2024-Update
MA_10375359g0010 No alias (at4g26200 : 342.0) Member of a family of proteins in... 0.05 Orthogroups_2024-Update
MA_117710g0010 No alias (at4g26200 : 493.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
MA_121240g0010 No alias (at4g26200 : 551.0) Member of a family of proteins in... 0.04 Orthogroups_2024-Update
MA_17005g0010 No alias (q00257|1a12_cucma : 566.0)... 0.04 Orthogroups_2024-Update
MA_882654g0010 No alias (p31531|1a1c_soybn : 292.0)... 0.06 Orthogroups_2024-Update
PSME_00036726-RA No alias (at4g26200 : 552.0) Member of a family of proteins in... 0.04 Orthogroups_2024-Update
PSME_00048891-RA No alias (q00257|1a12_cucma : 494.0)... 0.03 Orthogroups_2024-Update
Potri.002G113900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
Potri.002G163700 No alias ACC synthase 1 0.04 Orthogroups_2024-Update
Potri.003G117700 No alias ACC synthase 10 0.03 Orthogroups_2024-Update
Potri.014G012600 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
Seita.5G136200.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Seita.7G208700.1 No alias EC_4.4 carbon-sulfur lyase &... 0.04 Orthogroups_2024-Update
Sobic.006G187900.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Solyc02g063540 No alias 1-aminocyclopropane-1-carboxylate synthase 7 0.03 Orthogroups_2024-Update
Solyc04g077410 No alias 1-aminocyclopropane-1-carboxylate synthase 5 0.03 Orthogroups_2024-Update
Solyc07g026900 No alias 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc08g081540 No alias 1-aminocyclopropane-1-carboxylate synthase 1A 0.03 Orthogroups_2024-Update
Sopen02g036570 No alias Aminotransferase class I and II 0.04 Orthogroups_2024-Update
Sopen07g014620 No alias Aminotransferase class I and II 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 62 442
No external refs found!