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  5. PSME_00031273-RA

PSME_00031273-RA


Description : (at4g36220 : 401.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (q42798|c93a1_soybn : 395.0) Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 802.0) & (original description: no original description)


Gene families : OG_42_0000031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031273-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
113134 No alias Cytochrome P450 superfamily protein 0.04 Orthogroups_2024-Update
115322 No alias Cytochrome P450 superfamily protein 0.07 Orthogroups_2024-Update
115634 No alias Cytochrome P450 superfamily protein 0.07 Orthogroups_2024-Update
116301 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
124314 No alias Cytochrome P450 superfamily protein 0.05 Orthogroups_2024-Update
126936 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
20611 No alias Cytochrome P450 superfamily protein 0.04 Orthogroups_2024-Update
22372 No alias Cytochrome P450 superfamily protein 0.04 Orthogroups_2024-Update
421431 No alias Cytochrome P450 superfamily protein 0.07 Orthogroups_2024-Update
93924 No alias cytochrome P450, family 71, subfamily B, polypeptide 10 0.02 Orthogroups_2024-Update
A4A49_38865 No alias cytochrome p450 71a2 0.01 Orthogroups_2024-Update
At5g24950 No alias Cytochrome P450 71A15 [Source:UniProtKB/Swiss-Prot;Acc:P58046] 0.02 Orthogroups_2024-Update
Bradi2g07577 No alias cytochrome P450, family 71, subfamily A, polypeptide 25 0.02 Orthogroups_2024-Update
Bradi2g07597 No alias cytochrome P450, family 71, subfamily A, polypeptide 24 0.04 Orthogroups_2024-Update
Bradi4g16560 No alias Cytochrome P450 superfamily protein 0.07 Orthogroups_2024-Update
Bradi4g39240 No alias cytochrome P450, family 71, subfamily B, polypeptide 2 0.05 Orthogroups_2024-Update
Brara.F02160.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
GRMZM2G085845 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G110400 No alias cytochrome P450, family 71, subfamily A, polypeptide 20 0.02 Orthogroups_2024-Update
Glyma.05G042500 No alias cytochrome P450, family 71, subfamily A, polypeptide 20 0.04 Orthogroups_2024-Update
Glyma.07G089900 No alias cytochrome P450, family 71, subfamily A, polypeptide 22 0.02 Orthogroups_2024-Update
Glyma.09G186200 No alias cytochrome P450, family 71, subfamily A, polypeptide 22 0.04 Orthogroups_2024-Update
Glyma.13G181900 No alias cytochrome P450, family 71, subfamily A, polypeptide 25 0.03 Orthogroups_2024-Update
Glyma.16G008600 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G195500 No alias cytochrome P450, family 71, subfamily A, polypeptide 26 0.02 Orthogroups_2024-Update
Glyma.17G125300 No alias cytochrome P450, family 71, subfamily B, polypeptide 37 0.04 Orthogroups_2024-Update
HORVU1Hr1G094880.9 No alias flavonoid 3'-hydroxylase *(F3'H) & EC_1.14... 0.03 Orthogroups_2024-Update
HORVU3Hr1G030950.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
HORVU3Hr1G031020.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
HORVU5Hr1G117710.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
LOC_Os05g43910 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430254g0010 No alias (q9sbq9|f3ph_pethy : 482.0) Flavonoid 3'-monooxygenase... 0.05 Orthogroups_2024-Update
MA_10433066g0010 No alias "(at5g06900 : 236.0) member of CYP93D; ""cytochrome... 0.05 Orthogroups_2024-Update
MA_134595g0010 No alias (at5g07990 : 373.0) Required for flavonoid 3'... 0.04 Orthogroups_2024-Update
MA_14663g0020 No alias (at4g36220 : 335.0) encodes ferulate 5-hydroxylase... 0.05 Orthogroups_2024-Update
MA_158072g0010 No alias (q9sbq9|f3ph_pethy : 420.0) Flavonoid 3'-monooxygenase... 0.04 Orthogroups_2024-Update
MA_177813g0010 No alias (at5g07990 : 371.0) Required for flavonoid 3'... 0.04 Orthogroups_2024-Update
MA_24539g0010 No alias (at4g36220 : 351.0) encodes ferulate 5-hydroxylase... 0.04 Orthogroups_2024-Update
MA_7247276g0010 No alias (o48923|c71da_soybn : 329.0) Cytochrome P450 71D10 (EC... 0.05 Orthogroups_2024-Update
MA_9169998g0010 No alias (at5g07990 : 367.0) Required for flavonoid 3'... 0.03 Orthogroups_2024-Update
Mp3g20410.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Orthogroups_2024-Update
Mp5g10800.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Orthogroups_2024-Update
PSME_00007152-RA No alias (at4g36220 : 369.0) encodes ferulate 5-hydroxylase... 0.03 Orthogroups_2024-Update
PSME_00007153-RA No alias (at4g36220 : 335.0) encodes ferulate 5-hydroxylase... 0.03 Orthogroups_2024-Update
PSME_00010797-RA No alias (at5g07990 : 358.0) Required for flavonoid 3'... 0.07 Orthogroups_2024-Update
PSME_00010798-RA No alias "(at3g48280 : 398.0) putative cytochrome P450;... 0.04 Orthogroups_2024-Update
PSME_00013671-RA No alias (o81970|c71a9_soybn : 380.0) Cytochrome P450 71A9 (EC... 0.08 Orthogroups_2024-Update
PSME_00017416-RA No alias "(at3g48270 : 179.0) putative cytochrome P450;... 0.03 Orthogroups_2024-Update
PSME_00026150-RA No alias (q9sbq9|f3ph_pethy : 410.0) Flavonoid 3'-monooxygenase... 0.04 Orthogroups_2024-Update
PSME_00027625-RA No alias (q9sbq9|f3ph_pethy : 417.0) Flavonoid 3'-monooxygenase... 0.03 Orthogroups_2024-Update
PSME_00040421-RA No alias (at4g36220 : 284.0) encodes ferulate 5-hydroxylase... 0.04 Orthogroups_2024-Update
PSME_00044869-RA No alias (o81970|c71a9_soybn : 362.0) Cytochrome P450 71A9 (EC... 0.04 Orthogroups_2024-Update
PSME_00046389-RA No alias (at4g36220 : 248.0) encodes ferulate 5-hydroxylase... 0.04 Orthogroups_2024-Update
PSME_00046435-RA No alias (p37120|c75a2_solme : 307.0) Flavonoid 3',5'-hydroxylase... 0.04 Orthogroups_2024-Update
PSME_00049088-RA No alias (q9sbq9|f3ph_pethy : 380.0) Flavonoid 3'-monooxygenase... 0.04 Orthogroups_2024-Update
PSME_00053146-RA No alias (at5g07990 : 305.0) Required for flavonoid 3'... 0.04 Orthogroups_2024-Update
PSME_00053651-RA No alias "(at3g48270 : 382.0) putative cytochrome P450;... 0.05 Orthogroups_2024-Update
PSME_00055503-RA No alias (p37120|c75a2_solme : 489.0) Flavonoid 3',5'-hydroxylase... 0.04 Orthogroups_2024-Update
Potri.001G167800 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G066800 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G051300 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Pp1s91_192V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.2G219600.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Seita.2G219700.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.3G298400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.05 Orthogroups_2024-Update
Seita.3G327400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.5G010100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.5G010200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.9G242900.1 No alias flavonoid 3'-hydroxylase *(F3'H) & EC_1.14... 0.02 Orthogroups_2024-Update
Seita.9G397000.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.002G040400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.004G200800.1 No alias flavonoid 3'-hydroxylase *(F3'H) & EC_1.14... 0.02 Orthogroups_2024-Update
Sobic.007G044900.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.009G162500.1 No alias flavonoid 3'-hydroxylase *(F3'H) & EC_1.14... 0.04 Orthogroups_2024-Update
Solyc03g112010 No alias Cytochrome P450 (AHRD V3.3 *** A0A103XWG4_CYNCS) 0.03 Orthogroups_2024-Update
Solyc03g122350 No alias Cytochrome P450 (AHRD V3.3 *** Q0PNH1_CAPCH) 0.03 Orthogroups_2024-Update
Solyc04g054220 No alias Cytochrome P450 (AHRD V3.3 *** A0A061DI80_THECC) 0.04 Orthogroups_2024-Update
Solyc04g054260 No alias Cytochrome P450 family protein (AHRD V3.3 *** B9HFW5_POPTR) 0.03 Orthogroups_2024-Update
Solyc04g071780 No alias Cytochrome P450 (AHRD V3.3 *** A0A0B0NSU6_GOSAR) 0.03 Orthogroups_2024-Update
Sopen03g031050 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen03g031130 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen03g034260 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen04g005860 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen04g021480 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 52 504
No external refs found!