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PSME_00031359-RA


Description : (at1g11290 : 523.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 126.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1046.0) & (original description: no original description)


Gene families : OG_42_0011674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011674_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031359-RA
Cluster HCCA clusters: Cluster_42


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 674 696
IPR002885 Pentatricopeptide_repeat 739 768
IPR002885 Pentatricopeptide_repeat 136 165
IPR002885 Pentatricopeptide_repeat 166 194
IPR002885 Pentatricopeptide_repeat 107 133
IPR002885 Pentatricopeptide_repeat 472 496
IPR002885 Pentatricopeptide_repeat 371 396
IPR002885 Pentatricopeptide_repeat 498 545
IPR002885 Pentatricopeptide_repeat 195 242
IPR002885 Pentatricopeptide_repeat 397 443
IPR002885 Pentatricopeptide_repeat 296 343
IPR002885 Pentatricopeptide_repeat 599 646
IPR032867 DYW_dom 772 823
No external refs found!