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Description : (at5g55840 : 413.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 358.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 826.0) & (original description: no original description)
Gene families : OG_42_0126562 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00031386-RA | |
| Cluster | HCCA clusters: Cluster_188 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Predicted GO |
| MF | GO:0004555 | alpha,alpha-trehalase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0015927 | trehalase activity | IEP | Predicted GO |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 200 | 231 |
| IPR002885 | Pentatricopeptide_repeat | 369 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 581 | 609 |
| IPR002885 | Pentatricopeptide_repeat | 475 | 506 |
| IPR002885 | Pentatricopeptide_repeat | 621 | 667 |
| IPR002885 | Pentatricopeptide_repeat | 133 | 181 |
| IPR002885 | Pentatricopeptide_repeat | 788 | 835 |
| IPR002885 | Pentatricopeptide_repeat | 855 | 891 |
| IPR002885 | Pentatricopeptide_repeat | 513 | 562 |
| IPR002885 | Pentatricopeptide_repeat | 936 | 985 |
| IPR002885 | Pentatricopeptide_repeat | 305 | 354 |
| IPR002885 | Pentatricopeptide_repeat | 408 | 457 |
| IPR002885 | Pentatricopeptide_repeat | 238 | 287 |
| No external refs found! |