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  5. PSME_00031537-RA

PSME_00031537-RA


Description : (at5g42260 : 511.0) beta glucosidase 12 (BGLU12); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49235|bglc_maize : 437.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1022.0) & (original description: no original description)


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00031537-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
76748 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
Brara.D00182.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.E00432.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.I04146.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.07G258700 No alias beta glucosidase 46 0.02 Orthogroups_2024-Update
Glyma.11G129600 No alias beta glucosidase 17 0.02 Orthogroups_2024-Update
Glyma.12G054000 No alias beta glucosidase 17 0.03 Orthogroups_2024-Update
Glyma.15G031400 No alias beta glucosidase 15 0.03 Orthogroups_2024-Update
HORVU0Hr1G020750.15 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU3Hr1G097010.17 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
PSME_00019735-RA No alias (at1g26560 : 751.0) beta glucosidase 40 (BGLU40);... 0.04 Orthogroups_2024-Update
Potri.001G403900 No alias beta-glucosidase 45 0.03 Orthogroups_2024-Update
Potri.010G178800 No alias beta glucosidase 42 0.03 Orthogroups_2024-Update
Pp1s76_8V6 No alias latex cyanogenic beta glucosidase 0.02 Orthogroups_2024-Update
Pp1s9_78V6 No alias ac074354_15 beta-glucosidase 0.03 Orthogroups_2024-Update
Sobic.006G117400.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sopen03g037970 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update
Sopen09g029890 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update
Sopen12g020190 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 147 498
IPR001360 Glyco_hydro_1 529 607
IPR001360 Glyco_hydro_1 41 109
No external refs found!