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  5. PSME_00032170-RA

PSME_00032170-RA


Description : (at1g80820 : 248.0) Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.; cinnamoyl coa reductase (CCR2); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase 1 (TAIR:AT1G15950.1); Has 10779 Blast hits to 10766 proteins in 1817 species: Archae - 140; Bacteria - 4512; Metazoa - 410; Fungi - 946; Plants - 2512; Viruses - 14; Other Eukaryotes - 2245 (source: NCBI BLink). & (p51108|dfra_maize : 137.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 496.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00032170-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
271114 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
Brara.B03104.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G03446.1 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
LOC_Os08g34280 No alias cinnamoyl-CoA reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_137109g0010 No alias (at1g15950 : 414.0) Encodes a cinnamoyl CoA reductase.... 0.03 Orthogroups_2024-Update
PSME_00011996-RA No alias (at1g61720 : 302.0) Negative regulator of flavonoid... 0.03 Orthogroups_2024-Update
PSME_00012476-RA No alias (p51110|dfra_vitvi : 361.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
PSME_00012477-RA No alias (p51110|dfra_vitvi : 438.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
PSME_00025560-RA No alias (at1g80820 : 325.0) Encodes an cinnamoyl CoA reductase... 0.04 Orthogroups_2024-Update
PSME_00032578-RA No alias (at5g19440 : 209.0) similar to Eucalyptus gunnii alcohol... 0.06 Orthogroups_2024-Update
Potri.001G256400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G004500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G062400.1 No alias cinnamoyl-CoA reductase *(CCR) 0.03 Orthogroups_2024-Update
Seita.2G256100.1 No alias phaseic acid reductase *(CRL1/2) 0.02 Orthogroups_2024-Update
Seita.4G048300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G038000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g087640 No alias alcohol dehydrogenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 16 217
No external refs found!